Decapterus maruadsi is a commercially important species in China, but has been heavily exploited in some areas. There is a growing need to develop microsatellites promoting its genetic research for the adequate management of this fishery resources. The recently developed specific-locus amplified fragment sequencing (SLAF-seq) is an efficient and high-resolution method for genome-wide microsatellite markers discovery. In this study, 28 905 microsatellites (mono- to hexa-nucleotide repeats) were identified using SLAF-seq technology, of which di-nucleotide was the most frequent (13 590, 47.02%), followed by mono-nucleotide (8 138, 28.15%), tri-nucleotide (5 727, 19.81%), tetra-nucleotide (1 104, 3.82%), pentanucleotide (234, 0.81%), and hexa-nucleotide (112, 0.39%). One hundred and thirty-two microsatellite loci (di- and tri-nucleotide) were randomly selected for amplification and polymorphism, of which 49 were highly polymorphic and well-resolved. The average number of alleles per locus was 13.63, ranging from 4 to 25, and allele sizes varied between 110 bp and 309 bp. The observed heterozygosity ( Ho ) and expected heterozygosity ( He ) ranged from 0.233 to 1.000 and from 0.374 to 0.959, with mean values of 0.738 and 0.836, respectively. The polymorphism information content (PIC) ranged from 0.341 to 0.941 (mean=0.806). However, 12 loci deviated from Hardy-Weinberg equilibrium. Furthermore, transferability tests were also successful in validating the utility of the developed markers in five phylogenetically related species of family Carangidae. A total of 48 microsatellite markers were successfully cross-amplified in Decapterus macarellus, Decapterus macrosoma, Decapterus kurroides, Trachurus japonicus, and Selaroides leptolepis. The present microsatellites provided the first known set of microsatellite DNA markers for D. maruadsi, D. macarellus, D. kurroides, and D. macrosoma, and would be useful for further population genetic and molecular phylogeny studies as well as help with the fisheries management formulation and implementation of the understudied species.
It is important to find a reliable method to estimate maximum sustainable yield(MSY) or total allowable catch(TAC) for fishery management, especially when the data availability is limited which is a case in China. A recently developed method(CMSY) is a data-poor method, which requires only catch data, resilience and exploitation history at the first and final years of the catch data. CMSY was used in this study to estimate the biological reference points for Largehead hairtail(Trichiurus lepturus, Temminck and Schlegel) in the Yellow Sea and Bohai Sea, based on the fishery data from China Fishery Statistical Year Books during 1986 to 2012. Additionally,Bayesian state-space Schaefer surplus production model(BSM) and the classical surplus production models(Schaefer and Fox) performed by software CEDA and ASPIC, were also projected in this study to compare with the performance of CMSY. The estimated MSYs from all models are about 19.7×104–27.0×104 t, while CMSY and BSM yielded more reasonable population parameter estimates(the intrinsic population growth rate and the carrying capacity). The biological reference points of B/BMSY smaller than 1.0, while F/FMSY higher than 1.0 revealed an over-exploitation of the fishery, indicating that more conservative management strategies are required for Largehead hairtail fishery. 相似文献
The Atlantic inflow in the Fram Strait(78°50′N) has synoptic scale variability based on an array of moorings over the period of 1998–2010. The synoptic scale variability of Atlantic inflow, whose significant cycle is 3–16 d, occurs mainly in winter and spring(from January to April) and is related with polar lows in the Barents Sea. On the synoptic scale, the enhancement(weakening) of Atlantic inflow in the Fram Strait is accompanied by less(more)polar lows in the Barents Sea. Wind stress curl induced by polar lows in the Barents Sea causes Ekman-transport,leads to decrease of sea surface height in the Barents Sea, due to geostrophic adjustment, further induces a cyclonic circulation anomaly around the Barents Sea, and causes the weakening of the Atlantic inflow in the Fram Strait. Our results highlight the importance of polar lows in forcing the Atlantic inflow in the Fram Strait and can help us to further understand the effect of Atlantic warm water on the change of the Arctic Ocean. 相似文献
